Released in version 3.0!

It is! If you've seen our recent survey and its results, we are going to prioritize this feature quite soon!

Burrum, really glad to see that you're still with us! :))

Still no luck properly reproducing the issue ;(
Does it happen after you start CN manually by clicking its icon, or only when CN autostarts with the system?
Maybe you could send your cintanotes.settings file to support@cintanotes.com? Thanks in advance!

A new beta with this feature is coming soon! Still ironing out syncing issues, for details please see here:
http://cintanotes.com/forum/viewtopic.php?f=3&t=1997

Hi GoD,
Can't reproduce the problem here (on Windows 7 and Windows 8.1), the tray icon correctly reappears after I manually kill and restart explorer.exe from Task Manager.
Could you please tell me which version of Windows you are using now (still Win7?), and detailed steps to reproduce the problem? Thanks!

If you put the remark's text into the note's _title_, you don't have to click - the title will be displayed in a tooltip when you hover with the mouse over the link.

However what you're suggesting is an interesting feature, although not very easy to implement. However if many people vote for it, we'll put into our schedule without doubt.

Thanks for the suggestion!
One simple workaround till we implement this is to do something like this:
Here is some text[1]. Here is some more text with another annotation[2]. And another one[3].

Just for the sake of completeness, there's another way to do it. If you e.g. select the word "text", please Alt+Shift+N, select "Create new note" and write in the new note's title "This is actually a German translation", you'll be able to see the remark when hovering over the word. (In order for the "remark" notes not to be in your way, you can put them into a separate section of the notebook.) But the word will be turned into a link, this may or may not be acceptable for you.
The advantage of this approach is that you don't have to renumber half of remarks if you insert another one into the middle.

Thanks for the info. Well this is highly unusual way to use the program. I suggest you simply change the "backup.checkperiod.minutes" parameter to 1, this should reduce the problem (don't change it to 0, this will make the app unresponsive). Note that backup is a background process that is designed to run while the program is idle, and since you run CN for such a short time, there's no guarantee that backup will be able to finish before you exit the program. You can however also do a manual backup which runs in foreground using the File/Backup/Backup Now command.